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SRX003564: 454 whole genome shotgun sequencing of genomic DNA paired-end library '454-2249' containing sample 'BROAD:SEQUENCING_SAMPLE:27711.0'
1 LS454 (454 GS FLX) run: 3,154 spots, 1M bases, 2.2Mb downloads

UUID: 8ef17507-7e09-4c35-9701-8f7c8b8b8d61
Design: 15x fragment; 30x physical paired
Submitted by: Broad Institute (BI)
Study: Reference Genome for Human Microbiome Project
PRJNA41563 • SRP001774 • All experiments • All runs
show Abstracthide Abstract
This strain will be used for comparative genome analysis.
Sample: Generic sample from Fusobacterium nucleatum subsp. vincentii 3_1_27
SAMN00102988 • SRS002824 • All experiments • All runs
Organism: Fusobacterium vincentii 3_1_27
Library:
Name: 454-2249
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
          barcode
Group tagBasecalls
DamascusTGTCCGGTC
14  forward           reverse

Experiment attributes: (show all 6 attributes...) (hide...)
analysis_type: Assembly
gssr_id: 27711.2
lsid: BROAD:SEQUENCING_SAMPLE:27711.2
material_type: Genomic DNA
project: G3089
work_request: 18164
Pipeline: show...hide...
NameStepProgramVersion
base caller2009-02-23 11:01:32.0454BaseCaller2.0.00.17
Runs: 1 run, 3,154 spots, 1M bases, 2.2Mb
Run# of Spots# of BasesSizePublished
SRR1372023,1541M2.2Mb2011-03-25

ID:
3729

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